Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 GGT3P-204ENST00000453783 1664 ntBASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 MIR4492-201ENST00000581627 80 ntBASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
POLR2J3Q9H1A7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 AC087163.2-201ENST00000457299 853 ntBASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 MIR3652-201ENST00000579335 131 ntBASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 REXO1L3P-201ENST00000622202 1288 ntBASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 AL805961.1-202ENST00000641562 540 ntBASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 KRT8P39-201ENST00000396270 1433 ntBASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms