Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 ATG4B-220ENST00000482507 2414 ntTSL 1 (best)13.65□□□□□ -0.221e-8■□□□□ 10
CSTF2TQ9H0L4 ATG4B-212ENST00000430617 623 ntTSL 39.49□□□□□ -0.891e-8■□□□□ 10
CSTF2TQ9H0L4 TPST2-205ENST00000442495 586 ntTSL 220.45■□□□□ 0.861e-7■□□□□ 10
CSTF2TQ9H0L4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.761e-7■□□□□ 10
CSTF2TQ9H0L4 TPST2-207ENST00000450022 544 ntTSL 319.15■□□□□ 0.661e-7■□□□□ 10
CSTF2TQ9H0L4 ELOVL1-211ENST00000482302 984 ntTSL 318.32■□□□□ 0.521e-7■□□□□ 10
CSTF2TQ9H0L4 TPST2-204ENST00000440953 544 ntTSL 517.24■□□□□ 0.351e-7■□□□□ 10
CSTF2TQ9H0L4 ELOVL1-207ENST00000470968 867 ntTSL 516.91■□□□□ 0.31e-7■□□□□ 10
CSTF2TQ9H0L4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.271e-7■□□□□ 10
CSTF2TQ9H0L4 ELOVL1-203ENST00000464204 1034 ntTSL 1 (best)14.79□□□□□ -0.041e-7■□□□□ 10
CSTF2TQ9H0L4 ELOVL1-212ENST00000487209 828 ntTSL 214.19□□□□□ -0.141e-7■□□□□ 10
CSTF2TQ9H0L4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.271e-7■□□□□ 10
CSTF2TQ9H0L4 ELOVL1-214ENST00000497050 973 ntTSL 212.6□□□□□ -0.391e-7■□□□□ 10
CSTF2TQ9H0L4 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.43□□□□□ -0.421e-7■□□□□ 10
CSTF2TQ9H0L4 ELOVL1-204ENST00000465321 726 ntTSL 512.41□□□□□ -0.421e-7■□□□□ 10
CSTF2TQ9H0L4 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC11.96□□□□□ -0.491e-7■□□□□ 10
CSTF2TQ9H0L4 ELOVL1-213ENST00000496932 779 ntTSL 311.74□□□□□ -0.531e-7■□□□□ 10
CSTF2TQ9H0L4 ELOVL1-210ENST00000479686 417 ntTSL 311.69□□□□□ -0.541e-7■□□□□ 10
CSTF2TQ9H0L4 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.541e-7■□□□□ 10
CSTF2TQ9H0L4 ELOVL1-202ENST00000413844 1451 ntTSL 2 BASIC11.3□□□□□ -0.61e-7■□□□□ 10
CSTF2TQ9H0L4 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC11.27□□□□□ -0.611e-7■□□□□ 10
CSTF2TQ9H0L4 ABI1-204ENST00000376138 3503 ntTSL 1 (best) BASIC10.84□□□□□ -0.671e-7■□□□□ 10
CSTF2TQ9H0L4 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC10.08□□□□□ -0.81e-7■□□□□ 10
CSTF2TQ9H0L4 ABI1-201ENST00000346832 3289 ntTSL 2 BASIC9.07□□□□□ -0.961e-7■□□□□ 10
CSTF2TQ9H0L4 ABI1-205ENST00000376139 3516 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.011e-7■□□□□ 10
CSTF2TQ9H0L4 ABI1-208ENST00000376160 3515 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.031e-7■□□□□ 10
CSTF2TQ9H0L4 ABI1-209ENST00000376166 3441 ntTSL 1 (best) BASIC7.94□□□□□ -1.141e-7■□□□□ 10
CSTF2TQ9H0L4 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.64□□□□□ -1.351e-7■□□□□ 10
CSTF2TQ9H0L4 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.06□□□□□ -1.441e-7■□□□□ 10
CSTF2TQ9H0L4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.01□□□□□ -1.611e-7■□□□□ 10
CSTF2TQ9H0L4 ANAPC2-207ENST00000495611 747 ntTSL 217.38■□□□□ 0.371e-6■□□□□ 10
CSTF2TQ9H0L4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.41■□□□□ 0.225e-7■□□□□ 10
CSTF2TQ9H0L4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.085e-7■□□□□ 10
CSTF2TQ9H0L4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.83□□□□□ -0.25e-7■□□□□ 10
CSTF2TQ9H0L4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.81□□□□□ -0.25e-7■□□□□ 10
CSTF2TQ9H0L4 STX16-NPEPL1-201ENST00000413559 557 ntTSL 37.07□□□□□ -1.286e-7■□□□□ 10
CSTF2TQ9H0L4 MGAT1-223ENST00000514283 619 ntTSL 218.78■□□□□ 0.64e-7■□□□□ 10
CSTF2TQ9H0L4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.474e-7■□□□□ 10
CSTF2TQ9H0L4 MGAT1-206ENST00000502678 693 ntTSL 416.47■□□□□ 0.234e-7■□□□□ 10
CSTF2TQ9H0L4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.162e-9■□□□□ 10
CSTF2TQ9H0L4 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.57e-7■□□□□ 10
CSTF2TQ9H0L4 SLC20A1-204ENST00000433924 638 ntTSL 411.88□□□□□ -0.512e-9■□□□□ 10
CSTF2TQ9H0L4 P2RX6-209ENST00000591411 242 ntTSL 510.34□□□□□ -0.757e-7■□□□□ 10
CSTF2TQ9H0L4 P2RX6-202ENST00000413302 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.797e-7■□□□□ 10
CSTF2TQ9H0L4 SLC20A1-209ENST00000498224 692 ntTSL 29.43□□□□□ -0.92e-9■□□□□ 10
CSTF2TQ9H0L4 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.053e-6■□□□□ 10
CSTF2TQ9H0L4 SLC20A1-203ENST00000423633 668 ntTSL 27.81□□□□□ -1.162e-9■□□□□ 10
CSTF2TQ9H0L4 SLC20A1-205ENST00000456264 574 ntTSL 47.18□□□□□ -1.262e-9■□□□□ 10
CSTF2TQ9H0L4 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.89□□□□□ -1.317e-7■□□□□ 10
CSTF2TQ9H0L4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.357e-7■□□□□ 10
CSTF2TQ9H0L4 SLC20A1-202ENST00000413135 584 ntTSL 56.5□□□□□ -1.372e-9■□□□□ 10
CSTF2TQ9H0L4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.3□□□□□ -1.563e-6■□□□□ 10
CSTF2TQ9H0L4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.677e-7■□□□□ 10
CSTF2TQ9H0L4 TRIO-221ENST00000513206 7995 ntTSL 515.73■□□□□ 0.112e-9■□□□□ 10
CSTF2TQ9H0L4 TRIO-222ENST00000515144 7455 ntTSL 1 (best)14.25□□□□□ -0.132e-9■□□□□ 10
CSTF2TQ9H0L4 MIR3176-201ENST00000582210 90 ntBASIC5.33□□□□□ -1.562e-9■□□□□ 10
CSTF2TQ9H0L4 PCBP2-204ENST00000439930 1296 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.788e-15■□□□□ 10
CSTF2TQ9H0L4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.78■□□□□ 0.128e-7■□□□□ 10
CSTF2TQ9H0L4 CCND1-201ENST00000227507 4307 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.688e-7■□□□□ 10
CSTF2TQ9H0L4 COQ8A-207ENST00000485462 2141 ntTSL 1 (best)14.58□□□□□ -0.081e-6■□□□□ 10
CSTF2TQ9H0L4 GABBR1-213ENST00000485508 825 ntTSL 520.65■□□□□ 0.91e-7■□□□□ 10
CSTF2TQ9H0L4 GABBR1-216ENST00000489385 871 ntTSL 519.64■□□□□ 0.731e-7■□□□□ 10
CSTF2TQ9H0L4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.64■□□□□ 0.411e-7■□□□□ 10
CSTF2TQ9H0L4 GABBR1-220ENST00000494877 2364 ntTSL 515.54■□□□□ 0.081e-7■□□□□ 10
CSTF2TQ9H0L4 PRSS21-208ENST00000575199 679 ntTSL 220.06■□□□□ 0.85e-13■□□□□ 10
CSTF2TQ9H0L4 PRSS21-210ENST00000577043 814 ntTSL 517.37■□□□□ 0.375e-13■□□□□ 10
CSTF2TQ9H0L4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.19■□□□□ 0.021e-6■□□□□ 10
CSTF2TQ9H0L4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.031e-6■□□□□ 10
CSTF2TQ9H0L4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.34□□□□□ -0.271e-6■□□□□ 10
CSTF2TQ9H0L4 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.431e-6■□□□□ 10
CSTF2TQ9H0L4 SPIRE2-209ENST00000566337 1369 ntTSL 521.19■□□□□ 0.982e-6■□□□□ 10
CSTF2TQ9H0L4 SEMA4C-205ENST00000474420 2625 ntTSL 217.98■□□□□ 0.471e-12■□□□□ 10
CSTF2TQ9H0L4 SEMA4C-204ENST00000467747 3371 ntTSL 213.67□□□□□ -0.221e-12■□□□□ 10
CSTF2TQ9H0L4 SLC6A8-203ENST00000429147 334 ntTSL 215.61■□□□□ 0.093e-13■□□□□ 10
CSTF2TQ9H0L4 PCBP2-213ENST00000548933 1202 ntTSL 1 (best) BASIC8.31□□□□□ -1.088e-15■□□□□ 10
CSTF2TQ9H0L4 YWHAH-205ENST00000471374 1735 ntTSL 217.3■□□□□ 0.362e-9■□□□□ 10
CSTF2TQ9H0L4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.714e-11■□□□□ 10
CSTF2TQ9H0L4 TRRAP-205ENST00000456197 11654 ntAPPRIS ALT2 TSL 1 (best)7.47□□□□□ -1.219e-10■□□□□ 10
CSTF2TQ9H0L4 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.249e-10■□□□□ 10
CSTF2TQ9H0L4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.269e-10■□□□□ 10
CSTF2TQ9H0L4 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.39e-10■□□□□ 10
CSTF2TQ9H0L4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.499e-10■□□□□ 10
CSTF2TQ9H0L4 CIRBP-210ENST00000586636 938 ntTSL 217.38■□□□□ 0.373e-9■□□□□ 10
CSTF2TQ9H0L4 CIRBP-232ENST00000591376 830 ntTSL 317.38■□□□□ 0.373e-9■□□□□ 10
CSTF2TQ9H0L4 ARFGAP1-214ENST00000520485 1548 ntTSL 221.04■□□□□ 0.967e-8■□□□□ 10
CSTF2TQ9H0L4 ARFGAP1-211ENST00000519531 1490 ntTSL 316.68■□□□□ 0.267e-8■□□□□ 10
CSTF2TQ9H0L4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.257e-8■□□□□ 10
CSTF2TQ9H0L4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.29■□□□□ 0.047e-8■□□□□ 10
CSTF2TQ9H0L4 ARFGAP1-215ENST00000522403 995 ntTSL 515□□□□□ -0.017e-8■□□□□ 10
CSTF2TQ9H0L4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.76□□□□□ -0.057e-8■□□□□ 10
CSTF2TQ9H0L4 ARFGAP1-221ENST00000549047 1040 ntTSL 514.29□□□□□ -0.127e-8■□□□□ 10
CSTF2TQ9H0L4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.137e-8■□□□□ 10
CSTF2TQ9H0L4 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.8□□□□□ -0.27e-8■□□□□ 10
CSTF2TQ9H0L4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.277e-8■□□□□ 10
CSTF2TQ9H0L4 ARFGAP1-218ENST00000523460 572 ntTSL 413.29□□□□□ -0.287e-8■□□□□ 10
CSTF2TQ9H0L4 ARFGAP1-206ENST00000518601 905 ntTSL 512.29□□□□□ -0.447e-8■□□□□ 10
CSTF2TQ9H0L4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.272e-6■□□□□ 10
CSTF2TQ9H0L4 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC12.03□□□□□ -0.481e-70■□□□□ 10
CSTF2TQ9H0L4 RGS12-211ENST00000506998 1625 ntTSL 1 (best)18.05■□□□□ 0.482e-6■□□□□ 10
CSTF2TQ9H0L4 INTS11-242ENST00000531377 816 ntTSL 516.51■□□□□ 0.231e-11■□□□□ 9.9
Retrieved 100 of 19,151 protein–RNA pairs in 182.9 ms