Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 RBM17P3-201ENST00000417687 1192 ntBASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 LINC01711-201ENST00000598340 967 ntBASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 AC067930.6-201ENST00000623257 4947 ntBASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.04□□□□□ -0.16
RTN4IP1Q8WWV3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms