Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AC092364.2-201ENST00000596710 2692 ntBASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 PMS2P1-201ENST00000431037 1228 ntBASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 AC012640.2-201ENST00000561606 901 ntBASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 CYP2A7P1-201ENST00000595391 815 ntBASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 AC148477.8-201ENST00000624298 468 ntBASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 PCDH8P1-201ENST00000428983 2773 ntBASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 KRT8P39-201ENST00000396270 1433 ntBASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAF3IP1Q8TDR0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 AC092910.1-201ENST00000482027 1129 ntBASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 SLC22A20-204ENST00000530038 1673 ntBASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 AL773604.1-201ENST00000617417 272 ntBASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 AL031008.1-201ENST00000619963 541 ntBASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 FAM215A-202ENST00000632077 792 ntBASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TRAF3IP1Q8TDR0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.33■□□□□ 0.37
TRAF3IP1Q8TDR0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP1Q8TDR0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TRAF3IP1Q8TDR0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP1Q8TDR0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP1Q8TDR0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP1Q8TDR0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP1Q8TDR0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP1Q8TDR0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP1Q8TDR0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP1Q8TDR0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TRAF3IP1Q8TDR0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP1Q8TDR0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF3IP1Q8TDR0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 HCG4-201ENST00000418983 998 ntBASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms