Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CRLF3Q8IUI8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.68■□□□□ 0.26
CRLF3Q8IUI8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CRLF3Q8IUI8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 KLF4P1-201ENST00000412782 1185 ntBASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CRLF3Q8IUI8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 BNIP3P18-201ENST00000593976 575 ntBASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.66■□□□□ 0.26
CRLF3Q8IUI8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.65■□□□□ 0.26
CRLF3Q8IUI8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms