Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 RPS15P9-201ENST00000494093 319 ntBASIC15.18■□□□□ 0.02
NIPAL3Q6P499 AC079776.4-201ENST00000511039 504 ntBASIC15.18■□□□□ 0.02
NIPAL3Q6P499 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.18■□□□□ 0.02
NIPAL3Q6P499 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 AL805961.1-202ENST00000641562 540 ntBASIC15.18■□□□□ 0.02
NIPAL3Q6P499 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 AC132872.4-202ENST00000622924 2756 ntBASIC15.18■□□□□ 0.02
NIPAL3Q6P499 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 AC005052.1-201ENST00000625181 2492 ntBASIC15.17■□□□□ 0.02
NIPAL3Q6P499 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 AL365203.3-201ENST00000609742 2057 ntBASIC15.17■□□□□ 0.02
NIPAL3Q6P499 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 PGM5P2-202ENST00000637225 1043 ntBASIC15.17■□□□□ 0.02
NIPAL3Q6P499 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NIPAL3Q6P499 HLA-A-201ENST00000376802 1334 ntBASIC15.17■□□□□ 0.02
NIPAL3Q6P499 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms