Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 AC103702.1-201ENST00000548801 2630 ntBASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 AC005622.1-201ENST00000636801 1703 ntBASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKAL1Q5VV42 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDKAL1Q5VV42 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDKAL1Q5VV42 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.14■□□□□ 0.5
CDKAL1Q5VV42 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 ACTL9-202ENST00000612068 1252 ntBASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 AC008735.5-201ENST00000623544 497 ntBASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 AC011270.2-201ENST00000624293 2550 ntBASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKAL1Q5VV42 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms