Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 GGT4P-201ENST00000623672 1708 ntBASIC16.82■□□□□ 0.28
LGSNQ5TDP6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LGSNQ5TDP6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 LINC00265-3P-201ENST00000447588 903 ntBASIC16.81■□□□□ 0.28
LGSNQ5TDP6 AC074051.2-201ENST00000565115 352 ntBASIC16.81■□□□□ 0.28
LGSNQ5TDP6 AL049597.2-201ENST00000565575 961 ntBASIC16.81■□□□□ 0.28
LGSNQ5TDP6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 AC006449.6-201ENST00000612330 2296 ntBASIC16.81■□□□□ 0.28
LGSNQ5TDP6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGSNQ5TDP6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 KRT8P39-201ENST00000396270 1433 ntBASIC16.8■□□□□ 0.28
LGSNQ5TDP6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 AC104819.1-201ENST00000504587 486 ntBASIC16.8■□□□□ 0.28
LGSNQ5TDP6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 AP002414.4-201ENST00000589764 1148 ntBASIC16.8■□□□□ 0.28
LGSNQ5TDP6 AC092329.2-201ENST00000598402 547 ntBASIC16.8■□□□□ 0.28
LGSNQ5TDP6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 AL671710.1-201ENST00000610245 2349 ntBASIC16.8■□□□□ 0.28
LGSNQ5TDP6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.8■□□□□ 0.28
LGSNQ5TDP6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms