Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 AP000525.1-201ENST00000608286 694 ntBASIC12.98□□□□□ -0.33
ERVFC1-1P60608 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 AC010331.1-201ENST00000611423 582 ntBASIC12.98□□□□□ -0.33
ERVFC1-1P60608 AC005363.2-201ENST00000618631 242 ntBASIC12.98□□□□□ -0.33
ERVFC1-1P60608 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 AC073347.1-201ENST00000421633 2643 ntBASIC12.98□□□□□ -0.33
ERVFC1-1P60608 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.98□□□□□ -0.33
ERVFC1-1P60608 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ERVFC1-1P60608 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 MYCLP1-201ENST00000372451 1075 ntBASIC12.97□□□□□ -0.33
ERVFC1-1P60608 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 CRYGFP-201ENST00000418459 633 ntBASIC12.97□□□□□ -0.33
ERVFC1-1P60608 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 AL645728.1-201ENST00000366221 2101 ntBASIC12.97□□□□□ -0.33
ERVFC1-1P60608 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.97□□□□□ -0.33
ERVFC1-1P60608 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ERVFC1-1P60608 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ERVFC1-1P60608 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms