Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLK2P49760 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.71■□□□□ 0.59
CLK2P49760 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CLK2P49760 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK2P49760 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLK2P49760 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
CLK2P49760 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.71■□□□□ 0.59
CLK2P49760 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.71■□□□□ 0.59
CLK2P49760 PMS2P2-201ENST00000425039 1128 ntBASIC18.71■□□□□ 0.59
CLK2P49760 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.71■□□□□ 0.59
CLK2P49760 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.71■□□□□ 0.59
CLK2P49760 RARRES2P9-201ENST00000565168 469 ntBASIC18.71■□□□□ 0.59
CLK2P49760 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CLK2P49760 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK2P49760 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.71■□□□□ 0.59
CLK2P49760 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CLK2P49760 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK2P49760 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CLK2P49760 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.71■□□□□ 0.59
CLK2P49760 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLK2P49760 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLK2P49760 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK2P49760 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.71■□□□□ 0.59
CLK2P49760 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLK2P49760 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLK2P49760 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CLK2P49760 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CLK2P49760 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.7■□□□□ 0.58
CLK2P49760 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CLK2P49760 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CLK2P49760 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK2P49760 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CLK2P49760 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK2P49760 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.7■□□□□ 0.58
CLK2P49760 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK2P49760 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.7■□□□□ 0.58
CLK2P49760 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK2P49760 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK2P49760 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.7■□□□□ 0.58
CLK2P49760 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLK2P49760 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLK2P49760 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK2P49760 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.7■□□□□ 0.58
CLK2P49760 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.7■□□□□ 0.58
CLK2P49760 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLK2P49760 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLK2P49760 AC015911.4-201ENST00000588022 1070 ntBASIC18.7■□□□□ 0.58
CLK2P49760 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CLK2P49760 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.7■□□□□ 0.58
CLK2P49760 AC093028.1-201ENST00000622998 982 ntBASIC18.7■□□□□ 0.58
CLK2P49760 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK2P49760 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK2P49760 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK2P49760 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.7■□□□□ 0.58
CLK2P49760 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLK2P49760 HCG11-201ENST00000411553 5696 ntBASIC18.7■□□□□ 0.58
CLK2P49760 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLK2P49760 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK2P49760 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.69■□□□□ 0.58
CLK2P49760 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.69■□□□□ 0.58
CLK2P49760 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.69■□□□□ 0.58
CLK2P49760 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CLK2P49760 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK2P49760 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.69■□□□□ 0.58
CLK2P49760 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK2P49760 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.69■□□□□ 0.58
CLK2P49760 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.69■□□□□ 0.58
CLK2P49760 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK2P49760 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLK2P49760 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.69■□□□□ 0.58
CLK2P49760 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLK2P49760 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK2P49760 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.69■□□□□ 0.58
CLK2P49760 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK2P49760 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.69■□□□□ 0.58
CLK2P49760 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK2P49760 AL592424.1-201ENST00000563624 1536 ntBASIC18.69■□□□□ 0.58
CLK2P49760 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.69■□□□□ 0.58
CLK2P49760 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK2P49760 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.68■□□□□ 0.58
CLK2P49760 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK2P49760 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK2P49760 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLK2P49760 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLK2P49760 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK2P49760 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK2P49760 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK2P49760 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLK2P49760 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLK2P49760 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK2P49760 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLK2P49760 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CLK2P49760 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK2P49760 HLA-H-201ENST00000383620 1096 ntBASIC18.68■□□□□ 0.58
CLK2P49760 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK2P49760 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLK2P49760 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.68■□□□□ 0.58
CLK2P49760 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.68■□□□□ 0.58
CLK2P49760 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.68■□□□□ 0.58
CLK2P49760 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms