Protein–RNA interactions for Protein: P26441

CNTF, Ciliary neurotrophic factor, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFP26441 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNTFP26441 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNTFP26441 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CNTFP26441 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNTFP26441 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
CNTFP26441 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNTFP26441 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNTFP26441 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNTFP26441 PI4KAP1-204ENST00000612579 1703 ntBASIC16.62■□□□□ 0.25
CNTFP26441 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CNTFP26441 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CNTFP26441 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CNTFP26441 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CNTFP26441 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CNTFP26441 REXO1L8P-201ENST00000604378 1897 ntBASIC16.61■□□□□ 0.25
CNTFP26441 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CNTFP26441 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CNTFP26441 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CNTFP26441 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.61■□□□□ 0.25
CNTFP26441 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CNTFP26441 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTFP26441 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CNTFP26441 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 PTCHD3P3-201ENST00000403073 906 ntBASIC16.61■□□□□ 0.25
CNTFP26441 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.61■□□□□ 0.25
CNTFP26441 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.61■□□□□ 0.25
CNTFP26441 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CNTFP26441 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.61■□□□□ 0.25
CNTFP26441 AC087641.1-201ENST00000557561 1021 ntBASIC16.61■□□□□ 0.25
CNTFP26441 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 AC092119.3-201ENST00000612618 583 ntBASIC16.61■□□□□ 0.25
CNTFP26441 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.61■□□□□ 0.25
CNTFP26441 AL805961.1-202ENST00000641562 540 ntBASIC16.61■□□□□ 0.25
CNTFP26441 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.61■□□□□ 0.25
CNTFP26441 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.61■□□□□ 0.25
CNTFP26441 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CNTFP26441 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTFP26441 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.61■□□□□ 0.25
CNTFP26441 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CNTFP26441 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNTFP26441 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTFP26441 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CNTFP26441 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTFP26441 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 SLC22A20-204ENST00000530038 1673 ntBASIC16.6■□□□□ 0.25
CNTFP26441 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CNTFP26441 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CNTFP26441 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTFP26441 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTFP26441 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.6■□□□□ 0.25
CNTFP26441 HCG4-201ENST00000418983 998 ntBASIC16.6■□□□□ 0.25
CNTFP26441 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTFP26441 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CNTFP26441 AC005412.3-201ENST00000580309 715 ntBASIC16.6■□□□□ 0.25
CNTFP26441 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.6■□□□□ 0.25
CNTFP26441 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTFP26441 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTFP26441 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTFP26441 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 AC010491.1-201ENST00000563101 2797 ntBASIC16.6■□□□□ 0.25
CNTFP26441 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTFP26441 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTFP26441 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTFP26441 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.59■□□□□ 0.25
CNTFP26441 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.59■□□□□ 0.25
CNTFP26441 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTFP26441 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms