Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 AL353732.1-201ENST00000569618 1459 ntBASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 AC008608.2-201ENST00000606089 416 ntBASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 AC010654.1-201ENST00000615722 808 ntBASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV9S1A1TA0A576 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 AC092384.3-202ENST00000564646 2873 ntBASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 KRT18P31-201ENST00000506277 1292 ntBASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 AC025062.2-201ENST00000605477 670 ntBASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TCRBV9S1A1TA0A576 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms