Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 AL139400.1-201ENST00000366220 510 ntBASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 RN7SL589P-201ENST00000481268 310 ntBASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 IGHV3-62-201ENST00000520057 340 ntBASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VAT1LQ9HCJ6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 AC092171.3-201ENST00000610122 2651 ntBASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 PMS2P2-201ENST00000425039 1128 ntBASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 FAM58DP-201ENST00000428076 619 ntBASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 AC069335.1-201ENST00000489972 472 ntBASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 LINC01225-203ENST00000563550 1244 ntBASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.24■□□□□ 0.67
VAT1LQ9HCJ6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 AL627223.1-201ENST00000416693 442 ntBASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 AC004449.1-201ENST00000564240 433 ntBASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 AC027307.2-201ENST00000591252 911 ntBASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 AD000864.1-201ENST00000624076 2295 ntBASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 AC011676.5-201ENST00000624864 2660 ntBASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VAT1LQ9HCJ6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms