Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 RPSAP43-201ENST00000402237 625 ntBASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 ELK2BP-201ENST00000415014 1224 ntBASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 GPX1P2-201ENST00000429271 606 ntBASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 DDX43P3-201ENST00000441064 443 ntBASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 AC092183.1-201ENST00000469884 875 ntBASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 AC109462.3-201ENST00000573934 613 ntBASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 AC064836.3-201ENST00000607928 673 ntBASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 AL691403.2-201ENST00000618460 490 ntBASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 AC148477.5-201ENST00000625164 1645 ntBASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAF4Q9BUZ4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 AC004832.2-201ENST00000426397 482 ntBASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 AC002347.1-201ENST00000569543 541 ntBASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 MIR3687-2-201ENST00000577708 61 ntBASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 MIR3687-1-201ENST00000614492 61 ntBASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms