Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCD1Q96GM5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.46■□□□□ 0.38
SMARCD1Q96GM5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
SMARCD1Q96GM5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 MIR346-201ENST00000362234 95 ntBASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 PMS2P2-201ENST00000425039 1128 ntBASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 FAM58DP-201ENST00000428076 619 ntBASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 GGT3P-204ENST00000453783 1664 ntBASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCD1Q96GM5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 AL139400.1-201ENST00000366220 510 ntBASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 AC142381.1-201ENST00000426099 345 ntBASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 HLA-J-203ENST00000494367 1087 ntBASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 SLC25A39P2-201ENST00000537614 270 ntBASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 LINC00628-201ENST00000628516 1289 ntBASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SMARCD1Q96GM5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCD1Q96GM5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms