Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
RDH11Q8TC12 PAUPAR-201ENST00000630360 2965 ntBASIC16.4■□□□□ 0.22
RDH11Q8TC12 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RDH11Q8TC12 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RDH11Q8TC12 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RDH11Q8TC12 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.4■□□□□ 0.22
RDH11Q8TC12 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RDH11Q8TC12 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.4■□□□□ 0.22
RDH11Q8TC12 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
RDH11Q8TC12 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
RDH11Q8TC12 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.39■□□□□ 0.22
RDH11Q8TC12 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 AC138894.3-201ENST00000603787 634 ntBASIC16.39■□□□□ 0.21
RDH11Q8TC12 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 AC004706.3-202ENST00000621574 984 ntBASIC16.39■□□□□ 0.21
RDH11Q8TC12 AP001350.2-201ENST00000625104 1094 ntBASIC16.39■□□□□ 0.21
RDH11Q8TC12 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH11Q8TC12 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RDH11Q8TC12 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 SLC22A20-204ENST00000530038 1673 ntBASIC16.38■□□□□ 0.21
RDH11Q8TC12 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 AC020765.3-201ENST00000613051 740 ntBASIC16.38■□□□□ 0.21
RDH11Q8TC12 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.38■□□□□ 0.21
RDH11Q8TC12 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.38■□□□□ 0.21
RDH11Q8TC12 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RDH11Q8TC12 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RDH11Q8TC12 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RDH11Q8TC12 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms