Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PACS2Q86VP3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PACS2Q86VP3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PACS2Q86VP3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.83■□□□□ 0.28
PACS2Q86VP3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PACS2Q86VP3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PACS2Q86VP3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PACS2Q86VP3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PACS2Q86VP3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.83■□□□□ 0.28
PACS2Q86VP3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 PCED1CP-201ENST00000419887 785 ntBASIC16.82■□□□□ 0.28
PACS2Q86VP3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 PVRIG2P-201ENST00000435460 978 ntBASIC16.82■□□□□ 0.28
PACS2Q86VP3 FAM86EP-206ENST00000510506 987 ntBASIC16.82■□□□□ 0.28
PACS2Q86VP3 DUTP2-201ENST00000519164 463 ntBASIC16.82■□□□□ 0.28
PACS2Q86VP3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.82■□□□□ 0.28
PACS2Q86VP3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACS2Q86VP3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PACS2Q86VP3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 AP005117.1-202ENST00000581724 1908 ntBASIC16.81■□□□□ 0.28
PACS2Q86VP3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 ADAM3B-201ENST00000569937 840 ntBASIC16.81■□□□□ 0.28
PACS2Q86VP3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 AP000550.4-202ENST00000639755 178 ntBASIC16.81■□□□□ 0.28
PACS2Q86VP3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PACS2Q86VP3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACS2Q86VP3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms