Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC097374.2-201ENST00000618617 1306 ntBASIC14.97□□□□□ -0.01
VBP1P61758 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.97□□□□□ -0.01
VBP1P61758 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VBP1P61758 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.97□□□□□ -0.01
VBP1P61758 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
VBP1P61758 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.97□□□□□ -0.01
VBP1P61758 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.97□□□□□ -0.01
VBP1P61758 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.97□□□□□ -0.01
VBP1P61758 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.97□□□□□ -0.01
VBP1P61758 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.97□□□□□ -0.01
VBP1P61758 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
VBP1P61758 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.97□□□□□ -0.01
VBP1P61758 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.97□□□□□ -0.01
VBP1P61758 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.97□□□□□ -0.01
VBP1P61758 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
VBP1P61758 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.96□□□□□ -0.01
VBP1P61758 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.96□□□□□ -0.01
VBP1P61758 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
VBP1P61758 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
VBP1P61758 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.96□□□□□ -0.01
VBP1P61758 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.96□□□□□ -0.01
VBP1P61758 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.96□□□□□ -0.01
VBP1P61758 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.96□□□□□ -0.01
VBP1P61758 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
VBP1P61758 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
VBP1P61758 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.96□□□□□ -0.01
VBP1P61758 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.96□□□□□ -0.01
VBP1P61758 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.96□□□□□ -0.01
VBP1P61758 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.96□□□□□ -0.01
VBP1P61758 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.96□□□□□ -0.01
VBP1P61758 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
VBP1P61758 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.96□□□□□ -0.01
VBP1P61758 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
VBP1P61758 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VBP1P61758 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.96□□□□□ -0.01
VBP1P61758 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
VBP1P61758 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
VBP1P61758 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VBP1P61758 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VBP1P61758 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VBP1P61758 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.02
VBP1P61758 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VBP1P61758 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.95□□□□□ -0.02
VBP1P61758 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VBP1P61758 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VBP1P61758 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VBP1P61758 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VBP1P61758 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VBP1P61758 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VBP1P61758 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.95□□□□□ -0.02
VBP1P61758 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.95□□□□□ -0.02
VBP1P61758 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VBP1P61758 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VBP1P61758 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VBP1P61758 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VBP1P61758 AC097637.2-201ENST00000624096 1997 ntBASIC14.95□□□□□ -0.02
VBP1P61758 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VBP1P61758 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VBP1P61758 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms