Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ACTBP60709 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.37□□□□□ -0.11
ACTBP60709 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
ACTBP60709 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ACTBP60709 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.37□□□□□ -0.11
ACTBP60709 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ACTBP60709 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.37□□□□□ -0.11
ACTBP60709 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
ACTBP60709 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.37□□□□□ -0.11
ACTBP60709 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.37□□□□□ -0.11
ACTBP60709 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.37□□□□□ -0.11
ACTBP60709 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.37□□□□□ -0.11
ACTBP60709 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.37□□□□□ -0.11
ACTBP60709 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ACTBP60709 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.37□□□□□ -0.11
ACTBP60709 AL139011.1-202ENST00000642063 584 ntBASIC14.37□□□□□ -0.11
ACTBP60709 KRT8P10-201ENST00000450021 1447 ntBASIC14.37□□□□□ -0.11
ACTBP60709 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ACTBP60709 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ACTBP60709 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.37□□□□□ -0.11
ACTBP60709 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.37□□□□□ -0.11
ACTBP60709 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ACTBP60709 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.37□□□□□ -0.11
ACTBP60709 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.37□□□□□ -0.11
ACTBP60709 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACTBP60709 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ACTBP60709 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.36□□□□□ -0.11
ACTBP60709 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ACTBP60709 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.36□□□□□ -0.11
ACTBP60709 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 AC022532.1-201ENST00000624563 1728 ntBASIC14.36□□□□□ -0.11
ACTBP60709 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.36□□□□□ -0.11
ACTBP60709 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 AC003669.1-201ENST00000334569 611 ntBASIC14.36□□□□□ -0.11
ACTBP60709 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.36□□□□□ -0.11
ACTBP60709 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 GUSBP12-201ENST00000513727 720 ntBASIC14.36□□□□□ -0.11
ACTBP60709 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.36□□□□□ -0.11
ACTBP60709 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.36□□□□□ -0.11
ACTBP60709 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.36□□□□□ -0.11
ACTBP60709 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.36□□□□□ -0.11
ACTBP60709 AL353593.2-201ENST00000602529 1483 ntBASIC14.36□□□□□ -0.11
ACTBP60709 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 AC005332.1-201ENST00000577698 1310 ntBASIC14.36□□□□□ -0.11
ACTBP60709 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.36□□□□□ -0.11
ACTBP60709 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.36□□□□□ -0.11
ACTBP60709 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ACTBP60709 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.36□□□□□ -0.11
ACTBP60709 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACTBP60709 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ACTBP60709 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ACTBP60709 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ACTBP60709 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms