Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLRN1P58418 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLRN1P58418 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLRN1P58418 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLRN1P58418 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLRN1P58418 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.9□□□□□ -0.02
CLRN1P58418 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.9□□□□□ -0.02
CLRN1P58418 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.9□□□□□ -0.02
CLRN1P58418 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.9□□□□□ -0.02
CLRN1P58418 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLRN1P58418 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.9□□□□□ -0.02
CLRN1P58418 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.9□□□□□ -0.02
CLRN1P58418 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
CLRN1P58418 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.9□□□□□ -0.02
CLRN1P58418 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.9□□□□□ -0.02
CLRN1P58418 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.9□□□□□ -0.02
CLRN1P58418 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLRN1P58418 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.9□□□□□ -0.02
CLRN1P58418 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.9□□□□□ -0.02
CLRN1P58418 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLRN1P58418 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLRN1P58418 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
CLRN1P58418 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
CLRN1P58418 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLRN1P58418 SLC22A20-204ENST00000530038 1673 ntBASIC14.9□□□□□ -0.02
CLRN1P58418 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CLRN1P58418 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CLRN1P58418 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.89□□□□□ -0.03
CLRN1P58418 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLRN1P58418 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLRN1P58418 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.89□□□□□ -0.03
CLRN1P58418 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLRN1P58418 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CLRN1P58418 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CLRN1P58418 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLRN1P58418 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLRN1P58418 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLRN1P58418 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLRN1P58418 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CLRN1P58418 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.89□□□□□ -0.03
CLRN1P58418 PRSS29P-201ENST00000440800 595 ntBASIC14.89□□□□□ -0.03
CLRN1P58418 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.89□□□□□ -0.03
CLRN1P58418 SLC25A6P4-201ENST00000586535 553 ntBASIC14.89□□□□□ -0.03
CLRN1P58418 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CLRN1P58418 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.89□□□□□ -0.03
CLRN1P58418 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLRN1P58418 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLRN1P58418 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
CLRN1P58418 KRT8P39-201ENST00000396270 1433 ntBASIC14.89□□□□□ -0.03
CLRN1P58418 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLRN1P58418 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLRN1P58418 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLRN1P58418 PCDHB19P-201ENST00000570871 2371 ntBASIC14.89□□□□□ -0.03
CLRN1P58418 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
CLRN1P58418 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLRN1P58418 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.89□□□□□ -0.03
CLRN1P58418 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CLRN1P58418 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CLRN1P58418 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.89□□□□□ -0.03
CLRN1P58418 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLRN1P58418 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLRN1P58418 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.88□□□□□ -0.03
CLRN1P58418 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.88□□□□□ -0.03
CLRN1P58418 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.88□□□□□ -0.03
CLRN1P58418 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.88□□□□□ -0.03
CLRN1P58418 CRYGEP-201ENST00000412192 528 ntBASIC14.88□□□□□ -0.03
CLRN1P58418 AC009078.2-202ENST00000463353 338 ntBASIC14.88□□□□□ -0.03
CLRN1P58418 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.88□□□□□ -0.03
CLRN1P58418 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.88□□□□□ -0.03
CLRN1P58418 UNC93B6-202ENST00000528242 690 ntBASIC14.88□□□□□ -0.03
CLRN1P58418 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.88□□□□□ -0.03
CLRN1P58418 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.88□□□□□ -0.03
CLRN1P58418 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CLRN1P58418 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLRN1P58418 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.88□□□□□ -0.03
CLRN1P58418 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.88□□□□□ -0.03
CLRN1P58418 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.88□□□□□ -0.03
CLRN1P58418 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CLRN1P58418 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CLRN1P58418 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLRN1P58418 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLRN1P58418 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLRN1P58418 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms