Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1DP48730 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.62■□□□□ 0.25
CSNK1DP48730 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1DP48730 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1DP48730 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1DP48730 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.62■□□□□ 0.25
CSNK1DP48730 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.62■□□□□ 0.25
CSNK1DP48730 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 FOXO1B-201ENST00000504678 1527 ntBASIC16.62■□□□□ 0.25
CSNK1DP48730 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1DP48730 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 AC011676.5-201ENST00000624864 2660 ntBASIC16.62■□□□□ 0.25
CSNK1DP48730 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CSNK1DP48730 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.62■□□□□ 0.25
CSNK1DP48730 KRT18P32-201ENST00000424695 1287 ntBASIC16.62■□□□□ 0.25
CSNK1DP48730 FAM58DP-201ENST00000428076 619 ntBASIC16.62■□□□□ 0.25
CSNK1DP48730 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1DP48730 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.62■□□□□ 0.25
CSNK1DP48730 SPTSSB-204ENST00000617024 1292 ntBASIC16.62■□□□□ 0.25
CSNK1DP48730 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CSNK1DP48730 ME2P1-201ENST00000426028 1970 ntBASIC16.62■□□□□ 0.25
CSNK1DP48730 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CSNK1DP48730 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CSNK1DP48730 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.62■□□□□ 0.25
CSNK1DP48730 UBALD1-205ENST00000590891 2641 ntBASIC16.62■□□□□ 0.25
CSNK1DP48730 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1DP48730 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
CSNK1DP48730 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.61■□□□□ 0.25
CSNK1DP48730 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.61■□□□□ 0.25
CSNK1DP48730 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.61■□□□□ 0.25
CSNK1DP48730 SLC25A39P2-201ENST00000537614 270 ntBASIC16.61■□□□□ 0.25
CSNK1DP48730 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.61■□□□□ 0.25
CSNK1DP48730 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.61■□□□□ 0.25
CSNK1DP48730 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.61■□□□□ 0.25
CSNK1DP48730 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.61■□□□□ 0.25
CSNK1DP48730 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
CSNK1DP48730 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.61■□□□□ 0.25
CSNK1DP48730 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.61■□□□□ 0.25
CSNK1DP48730 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
CSNK1DP48730 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1DP48730 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CSNK1DP48730 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CSNK1DP48730 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1DP48730 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1DP48730 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.6■□□□□ 0.25
CSNK1DP48730 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1DP48730 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CSNK1DP48730 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1DP48730 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1DP48730 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.6■□□□□ 0.25
CSNK1DP48730 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1DP48730 AC005622.1-201ENST00000636801 1703 ntBASIC16.6■□□□□ 0.25
CSNK1DP48730 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1DP48730 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.6■□□□□ 0.25
CSNK1DP48730 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1DP48730 GPS2P2-201ENST00000430745 888 ntBASIC16.6■□□□□ 0.25
CSNK1DP48730 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.6■□□□□ 0.25
CSNK1DP48730 AL512356.2-201ENST00000546955 174 ntBASIC16.6■□□□□ 0.25
CSNK1DP48730 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.6■□□□□ 0.25
CSNK1DP48730 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
CSNK1DP48730 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.6■□□□□ 0.25
CSNK1DP48730 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.6■□□□□ 0.25
CSNK1DP48730 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CSNK1DP48730 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1DP48730 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CSNK1DP48730 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms