Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.29■□□□□ 0.36
H2AFXP16104 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
H2AFXP16104 AC092666.2-201ENST00000613287 246 ntBASIC17.29■□□□□ 0.36
H2AFXP16104 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.29■□□□□ 0.36
H2AFXP16104 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.29■□□□□ 0.36
H2AFXP16104 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2AFXP16104 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2AFXP16104 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2AFXP16104 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H2AFXP16104 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H2AFXP16104 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2AFXP16104 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.29■□□□□ 0.36
H2AFXP16104 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.29■□□□□ 0.36
H2AFXP16104 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.28■□□□□ 0.36
H2AFXP16104 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
H2AFXP16104 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
H2AFXP16104 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
H2AFXP16104 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.28■□□□□ 0.36
H2AFXP16104 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.28■□□□□ 0.36
H2AFXP16104 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.28■□□□□ 0.36
H2AFXP16104 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
H2AFXP16104 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.28■□□□□ 0.36
H2AFXP16104 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.28■□□□□ 0.36
H2AFXP16104 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 LINC01144-201ENST00000626198 1710 ntBASIC17.28■□□□□ 0.36
H2AFXP16104 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.28■□□□□ 0.36
H2AFXP16104 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.28■□□□□ 0.36
H2AFXP16104 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.28■□□□□ 0.36
H2AFXP16104 C1QBPP2-201ENST00000528754 825 ntBASIC17.28■□□□□ 0.36
H2AFXP16104 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.28■□□□□ 0.36
H2AFXP16104 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.28■□□□□ 0.36
H2AFXP16104 AC079602.3-201ENST00000623931 403 ntBASIC17.28■□□□□ 0.36
H2AFXP16104 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
H2AFXP16104 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
H2AFXP16104 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.28■□□□□ 0.36
H2AFXP16104 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.28■□□□□ 0.36
H2AFXP16104 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
H2AFXP16104 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2AFXP16104 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
H2AFXP16104 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
H2AFXP16104 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2AFXP16104 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
H2AFXP16104 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.27■□□□□ 0.36
H2AFXP16104 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
H2AFXP16104 PCGF3-213ENST00000620529 1899 ntBASIC17.27■□□□□ 0.36
H2AFXP16104 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2AFXP16104 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.27■□□□□ 0.36
H2AFXP16104 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2AFXP16104 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
H2AFXP16104 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
H2AFXP16104 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
H2AFXP16104 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
H2AFXP16104 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.27■□□□□ 0.36
H2AFXP16104 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
H2AFXP16104 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2AFXP16104 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.27■□□□□ 0.36
H2AFXP16104 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.27■□□□□ 0.36
H2AFXP16104 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.27■□□□□ 0.36
H2AFXP16104 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
H2AFXP16104 AC107956.1-201ENST00000494359 873 ntBASIC17.27■□□□□ 0.36
H2AFXP16104 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2AFXP16104 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2AFXP16104 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
H2AFXP16104 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2AFXP16104 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.27■□□□□ 0.36
H2AFXP16104 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2AFXP16104 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
H2AFXP16104 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.27■□□□□ 0.35
H2AFXP16104 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
H2AFXP16104 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.27■□□□□ 0.35
H2AFXP16104 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.27■□□□□ 0.35
H2AFXP16104 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
H2AFXP16104 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.27■□□□□ 0.35
H2AFXP16104 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
H2AFXP16104 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
H2AFXP16104 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2AFXP16104 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.26■□□□□ 0.35
H2AFXP16104 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2AFXP16104 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC17.26■□□□□ 0.35
H2AFXP16104 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
H2AFXP16104 AC004817.3-201ENST00000602957 2129 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms