Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCNAP12004 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCNAP12004 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.28■□□□□ 0.2
PCNAP12004 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.28■□□□□ 0.2
PCNAP12004 KRT18P67-201ENST00000432816 1264 ntBASIC16.28■□□□□ 0.2
PCNAP12004 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.28■□□□□ 0.2
PCNAP12004 HNRNPDP1-201ENST00000439535 754 ntBASIC16.28■□□□□ 0.2
PCNAP12004 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.28■□□□□ 0.2
PCNAP12004 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCNAP12004 AC136632.2-201ENST00000512891 861 ntBASIC16.28■□□□□ 0.2
PCNAP12004 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.28■□□□□ 0.2
PCNAP12004 AL031008.1-201ENST00000619963 541 ntBASIC16.28■□□□□ 0.2
PCNAP12004 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCNAP12004 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCNAP12004 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.28■□□□□ 0.2
PCNAP12004 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCNAP12004 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCNAP12004 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.28■□□□□ 0.2
PCNAP12004 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.28■□□□□ 0.2
PCNAP12004 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCNAP12004 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.28■□□□□ 0.2
PCNAP12004 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.28■□□□□ 0.2
PCNAP12004 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.28■□□□□ 0.2
PCNAP12004 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCNAP12004 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PCNAP12004 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.28■□□□□ 0.2
PCNAP12004 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCNAP12004 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
PCNAP12004 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
PCNAP12004 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.28■□□□□ 0.2
PCNAP12004 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.27■□□□□ 0.2
PCNAP12004 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
PCNAP12004 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNAP12004 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNAP12004 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNAP12004 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.27■□□□□ 0.2
PCNAP12004 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCNAP12004 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCNAP12004 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PCNAP12004 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PCNAP12004 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.27■□□□□ 0.2
PCNAP12004 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PCNAP12004 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNAP12004 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNAP12004 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.27■□□□□ 0.2
PCNAP12004 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNAP12004 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PCNAP12004 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNAP12004 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNAP12004 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNAP12004 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNAP12004 RPS2P28-201ENST00000314255 741 ntBASIC16.27■□□□□ 0.2
PCNAP12004 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.27■□□□□ 0.2
PCNAP12004 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.27■□□□□ 0.2
PCNAP12004 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.27■□□□□ 0.2
PCNAP12004 KRT126P-201ENST00000549467 1181 ntBASIC16.27■□□□□ 0.2
PCNAP12004 AC105339.3-201ENST00000560043 636 ntBASIC16.27■□□□□ 0.2
PCNAP12004 AC008735.5-201ENST00000623544 497 ntBASIC16.27■□□□□ 0.2
PCNAP12004 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.27■□□□□ 0.2
PCNAP12004 AC148477.8-201ENST00000624298 468 ntBASIC16.27■□□□□ 0.2
PCNAP12004 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.27■□□□□ 0.2
PCNAP12004 AF228730.7-201ENST00000641842 219 ntBASIC16.27■□□□□ 0.2
PCNAP12004 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.27■□□□□ 0.2
PCNAP12004 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNAP12004 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PCNAP12004 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PCNAP12004 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCNAP12004 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCNAP12004 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCNAP12004 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCNAP12004 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PCNAP12004 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCNAP12004 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCNAP12004 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCNAP12004 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PCNAP12004 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PCNAP12004 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.26■□□□□ 0.19
PCNAP12004 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.26■□□□□ 0.19
PCNAP12004 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCNAP12004 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.26■□□□□ 0.19
PCNAP12004 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.26■□□□□ 0.19
PCNAP12004 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.26■□□□□ 0.19
PCNAP12004 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.26■□□□□ 0.19
PCNAP12004 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 KRT18P27-201ENST00000427733 1299 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms