Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CYP3A4P08684 ME2P1-201ENST00000426028 1970 ntBASIC18.61■□□□□ 0.57
CYP3A4P08684 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CYP3A4P08684 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CYP3A4P08684 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CYP3A4P08684 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.61■□□□□ 0.57
CYP3A4P08684 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CYP3A4P08684 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CYP3A4P08684 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CYP3A4P08684 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CYP3A4P08684 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.61■□□□□ 0.57
CYP3A4P08684 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CYP3A4P08684 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.61■□□□□ 0.57
CYP3A4P08684 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.61■□□□□ 0.57
CYP3A4P08684 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.61■□□□□ 0.57
CYP3A4P08684 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.61■□□□□ 0.57
CYP3A4P08684 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.61■□□□□ 0.57
CYP3A4P08684 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.61■□□□□ 0.57
CYP3A4P08684 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CYP3A4P08684 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CYP3A4P08684 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CYP3A4P08684 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CYP3A4P08684 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CYP3A4P08684 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CYP3A4P08684 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.6■□□□□ 0.57
CYP3A4P08684 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.6■□□□□ 0.57
CYP3A4P08684 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.6■□□□□ 0.57
CYP3A4P08684 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CYP3A4P08684 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CYP3A4P08684 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CYP3A4P08684 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.6■□□□□ 0.57
CYP3A4P08684 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CYP3A4P08684 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CYP3A4P08684 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CYP3A4P08684 HLA-H-201ENST00000383620 1096 ntBASIC18.6■□□□□ 0.57
CYP3A4P08684 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.6■□□□□ 0.57
CYP3A4P08684 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.6■□□□□ 0.57
CYP3A4P08684 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CYP3A4P08684 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.6■□□□□ 0.57
CYP3A4P08684 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.6■□□□□ 0.57
CYP3A4P08684 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.6■□□□□ 0.57
CYP3A4P08684 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.6■□□□□ 0.57
CYP3A4P08684 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CYP3A4P08684 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
CYP3A4P08684 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.6■□□□□ 0.57
CYP3A4P08684 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.6■□□□□ 0.57
CYP3A4P08684 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CYP3A4P08684 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CYP3A4P08684 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CYP3A4P08684 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CYP3A4P08684 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CYP3A4P08684 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.59■□□□□ 0.57
CYP3A4P08684 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYP3A4P08684 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.59■□□□□ 0.57
CYP3A4P08684 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.59■□□□□ 0.57
CYP3A4P08684 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYP3A4P08684 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYP3A4P08684 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CYP3A4P08684 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.59■□□□□ 0.57
CYP3A4P08684 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYP3A4P08684 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
CYP3A4P08684 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CYP3A4P08684 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYP3A4P08684 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CYP3A4P08684 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.59■□□□□ 0.57
CYP3A4P08684 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.59■□□□□ 0.57
CYP3A4P08684 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CYP3A4P08684 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYP3A4P08684 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CYP3A4P08684 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CYP3A4P08684 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CYP3A4P08684 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.59■□□□□ 0.57
CYP3A4P08684 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.59■□□□□ 0.57
CYP3A4P08684 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.59■□□□□ 0.57
CYP3A4P08684 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.59■□□□□ 0.57
CYP3A4P08684 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.59■□□□□ 0.57
CYP3A4P08684 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYP3A4P08684 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYP3A4P08684 Z92544.3-201ENST00000624747 417 ntBASIC18.59■□□□□ 0.57
CYP3A4P08684 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CYP3A4P08684 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYP3A4P08684 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYP3A4P08684 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CYP3A4P08684 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYP3A4P08684 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.58■□□□□ 0.57
CYP3A4P08684 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CYP3A4P08684 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CYP3A4P08684 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CYP3A4P08684 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CYP3A4P08684 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CYP3A4P08684 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.58■□□□□ 0.57
CYP3A4P08684 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
CYP3A4P08684 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CYP3A4P08684 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYP3A4P08684 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CYP3A4P08684 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.58■□□□□ 0.56
CYP3A4P08684 SPDYE7P-202ENST00000420373 878 ntBASIC18.58■□□□□ 0.56
CYP3A4P08684 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CYP3A4P08684 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.58■□□□□ 0.56
CYP3A4P08684 RFPL4AP1-201ENST00000530883 850 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms