Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.72□□□□□ -0.37
TCRAP04437 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TCRAP04437 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRAP04437 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
TCRAP04437 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.71□□□□□ -0.37
TCRAP04437 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.71□□□□□ -0.37
TCRAP04437 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.71□□□□□ -0.37
TCRAP04437 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.71□□□□□ -0.37
TCRAP04437 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.71□□□□□ -0.37
TCRAP04437 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.71□□□□□ -0.37
TCRAP04437 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.71□□□□□ -0.37
TCRAP04437 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.71□□□□□ -0.37
TCRAP04437 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.71□□□□□ -0.37
TCRAP04437 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 AP005117.1-202ENST00000581724 1908 ntBASIC12.71□□□□□ -0.37
TCRAP04437 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.71□□□□□ -0.37
TCRAP04437 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.71□□□□□ -0.37
TCRAP04437 AK4P3-201ENST00000418260 669 ntBASIC12.71□□□□□ -0.37
TCRAP04437 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.71□□□□□ -0.37
TCRAP04437 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.71□□□□□ -0.37
TCRAP04437 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.71□□□□□ -0.37
TCRAP04437 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.71□□□□□ -0.37
TCRAP04437 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
TCRAP04437 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TCRAP04437 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRAP04437 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TCRAP04437 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TCRAP04437 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
TCRAP04437 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
TCRAP04437 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.71□□□□□ -0.38
TCRAP04437 TP73-AS1-210ENST00000637775 1455 ntBASIC12.71□□□□□ -0.38
TCRAP04437 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
TCRAP04437 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
TCRAP04437 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
TCRAP04437 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.71□□□□□ -0.38
TCRAP04437 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TCRAP04437 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TCRAP04437 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.7□□□□□ -0.38
TCRAP04437 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.7□□□□□ -0.38
TCRAP04437 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.7□□□□□ -0.38
TCRAP04437 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TCRAP04437 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.7□□□□□ -0.38
TCRAP04437 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.7□□□□□ -0.38
TCRAP04437 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
TCRAP04437 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
TCRAP04437 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.7□□□□□ -0.38
TCRAP04437 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 LINC00982-205ENST00000420957 435 ntBASIC12.7□□□□□ -0.38
TCRAP04437 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TCRAP04437 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.7□□□□□ -0.38
TCRAP04437 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TCRAP04437 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.7□□□□□ -0.38
TCRAP04437 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TCRAP04437 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
TCRAP04437 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.7□□□□□ -0.38
TCRAP04437 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC12.7□□□□□ -0.38
TCRAP04437 AC011498.5-201ENST00000592027 486 ntBASIC12.7□□□□□ -0.38
TCRAP04437 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.7□□□□□ -0.38
TCRAP04437 TERC-201ENST00000602385 541 ntBASIC12.7□□□□□ -0.38
TCRAP04437 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.7□□□□□ -0.38
TCRAP04437 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TCRAP04437 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.7□□□□□ -0.38
TCRAP04437 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRAP04437 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms