Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.38□□□□□ -0.27
APOC3P02656 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.38□□□□□ -0.27
APOC3P02656 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.38□□□□□ -0.27
APOC3P02656 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC3P02656 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC3P02656 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.38□□□□□ -0.27
APOC3P02656 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
APOC3P02656 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC3P02656 AC013726.1-201ENST00000563747 2285 ntBASIC13.38□□□□□ -0.27
APOC3P02656 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
APOC3P02656 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.38□□□□□ -0.27
APOC3P02656 AC020658.6-201ENST00000623564 1870 ntBASIC13.38□□□□□ -0.27
APOC3P02656 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC3P02656 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.37□□□□□ -0.27
APOC3P02656 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC3P02656 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.37□□□□□ -0.27
APOC3P02656 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
APOC3P02656 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.37□□□□□ -0.27
APOC3P02656 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
APOC3P02656 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.37□□□□□ -0.27
APOC3P02656 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC3P02656 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC3P02656 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 KRT19P1-201ENST00000405746 1186 ntBASIC13.37□□□□□ -0.27
APOC3P02656 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC3P02656 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
APOC3P02656 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
APOC3P02656 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
APOC3P02656 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
APOC3P02656 AC027601.5-201ENST00000624065 2482 ntBASIC13.37□□□□□ -0.27
APOC3P02656 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC3P02656 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.37□□□□□ -0.27
APOC3P02656 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
APOC3P02656 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
APOC3P02656 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 AC016027.1-202ENST00000607927 1699 ntBASIC13.37□□□□□ -0.27
APOC3P02656 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.37□□□□□ -0.27
APOC3P02656 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
APOC3P02656 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC3P02656 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC3P02656 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC3P02656 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.36□□□□□ -0.27
APOC3P02656 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
APOC3P02656 AC099521.3-201ENST00000624251 2938 ntBASIC13.36□□□□□ -0.27
APOC3P02656 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
APOC3P02656 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC3P02656 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC3P02656 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.36□□□□□ -0.27
APOC3P02656 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC3P02656 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC3P02656 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC3P02656 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC3P02656 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC3P02656 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC3P02656 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.36□□□□□ -0.27
APOC3P02656 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC3P02656 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC3P02656 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC3P02656 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC3P02656 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.36□□□□□ -0.27
APOC3P02656 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
APOC3P02656 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC3P02656 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC3P02656 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.36□□□□□ -0.27
APOC3P02656 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.36□□□□□ -0.27
APOC3P02656 BX276092.7-203ENST00000637198 1536 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms