Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3O95983 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.12■□□□□ 0.65
MBD3O95983 AC069224.1-201ENST00000566372 1715 ntBASIC19.12■□□□□ 0.65
MBD3O95983 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3O95983 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.12■□□□□ 0.65
MBD3O95983 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3O95983 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3O95983 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3O95983 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3O95983 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3O95983 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
MBD3O95983 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
MBD3O95983 AC113347.1-201ENST00000413321 391 ntBASIC19.12■□□□□ 0.65
MBD3O95983 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.12■□□□□ 0.65
MBD3O95983 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.12■□□□□ 0.65
MBD3O95983 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.12■□□□□ 0.65
MBD3O95983 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.12■□□□□ 0.65
MBD3O95983 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.12■□□□□ 0.65
MBD3O95983 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.12■□□□□ 0.65
MBD3O95983 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.12■□□□□ 0.65
MBD3O95983 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.12■□□□□ 0.65
MBD3O95983 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3O95983 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3O95983 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
MBD3O95983 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
MBD3O95983 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.12■□□□□ 0.65
MBD3O95983 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
MBD3O95983 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.12■□□□□ 0.65
MBD3O95983 PPT1-215ENST00000641471 2368 ntBASIC19.12■□□□□ 0.65
MBD3O95983 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3O95983 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3O95983 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3O95983 PCGF3-213ENST00000620529 1899 ntBASIC19.11■□□□□ 0.65
MBD3O95983 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3O95983 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3O95983 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3O95983 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.11■□□□□ 0.65
MBD3O95983 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3O95983 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.11■□□□□ 0.65
MBD3O95983 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3O95983 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
MBD3O95983 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3O95983 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
MBD3O95983 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3O95983 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.11■□□□□ 0.65
MBD3O95983 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3O95983 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.11■□□□□ 0.65
MBD3O95983 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.11■□□□□ 0.65
MBD3O95983 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.11■□□□□ 0.65
MBD3O95983 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3O95983 TNRC18P2-201ENST00000417666 2714 ntBASIC19.11■□□□□ 0.65
MBD3O95983 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.11■□□□□ 0.65
MBD3O95983 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3O95983 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3O95983 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC19.11■□□□□ 0.65
MBD3O95983 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.11■□□□□ 0.65
MBD3O95983 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3O95983 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MBD3O95983 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.11■□□□□ 0.65
MBD3O95983 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MBD3O95983 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MBD3O95983 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.1■□□□□ 0.65
MBD3O95983 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MBD3O95983 TP73-AS1-210ENST00000637775 1455 ntBASIC19.1■□□□□ 0.65
MBD3O95983 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.1■□□□□ 0.65
MBD3O95983 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD3O95983 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD3O95983 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MBD3O95983 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MBD3O95983 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
MBD3O95983 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
MBD3O95983 AC087499.1-201ENST00000418141 1075 ntBASIC19.1■□□□□ 0.65
MBD3O95983 AL137013.1-201ENST00000432946 1228 ntBASIC19.1■□□□□ 0.65
MBD3O95983 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.1■□□□□ 0.65
MBD3O95983 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MBD3O95983 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.1■□□□□ 0.65
MBD3O95983 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.1■□□□□ 0.65
MBD3O95983 AL590326.2-201ENST00000625139 305 ntBASIC19.1■□□□□ 0.65
MBD3O95983 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.1■□□□□ 0.65
MBD3O95983 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.1■□□□□ 0.65
MBD3O95983 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.1■□□□□ 0.65
MBD3O95983 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MBD3O95983 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.1■□□□□ 0.65
MBD3O95983 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
MBD3O95983 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.1■□□□□ 0.65
MBD3O95983 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
MBD3O95983 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD3O95983 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.09■□□□□ 0.65
MBD3O95983 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
MBD3O95983 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD3O95983 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD3O95983 AL136379.1-201ENST00000623471 2642 ntBASIC19.09■□□□□ 0.65
MBD3O95983 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
MBD3O95983 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
MBD3O95983 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC19.09■□□□□ 0.65
MBD3O95983 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD3O95983 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.09■□□□□ 0.65
MBD3O95983 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MBD3O95983 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD3O95983 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms