Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HHLA3Q9XRX5 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 KRT18P31-201ENST00000506277 1292 ntBASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HHLA3Q9XRX5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HHLA3Q9XRX5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms