Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 AC007064.4-201ENST00000637740 555 ntBASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PPARGC1AQ9UBK2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
PPARGC1AQ9UBK2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PPARGC1AQ9UBK2 PCDHB17P-201ENST00000539533 2393 ntBASIC17.39■□□□□ 0.38
PPARGC1AQ9UBK2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 MIR4492-201ENST00000581627 80 ntBASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 SLC22A20-204ENST00000530038 1673 ntBASIC17.39■□□□□ 0.37
PPARGC1AQ9UBK2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 PGAM5P1-201ENST00000518923 814 ntBASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 MIR4515-201ENST00000584082 81 ntBASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 AC023141.13-201ENST00000604991 943 ntBASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 AL645728.2-201ENST00000641974 660 ntBASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 AC131009.4-201ENST00000624048 1740 ntBASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPARGC1AQ9UBK2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 AL162727.3-201ENST00000635661 2787 ntBASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 AC006277.1-201ENST00000624348 1610 ntBASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 AL513480.1-201ENST00000451731 511 ntBASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 POLD2P1-201ENST00000511220 997 ntBASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 AC004877.2-201ENST00000623941 599 ntBASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms