Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 MTHFR-217ENST00000641820 1569 ntBASIC15.57■□□□□ 0.08
RLIMQ9NVW2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 PI4KAP1-204ENST00000612579 1703 ntBASIC15.57■□□□□ 0.08
RLIMQ9NVW2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.57■□□□□ 0.08
RLIMQ9NVW2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RLIMQ9NVW2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 AC006277.1-201ENST00000624348 1610 ntBASIC15.55■□□□□ 0.08
RLIMQ9NVW2 AC006538.1-201ENST00000567905 1585 ntBASIC15.55■□□□□ 0.08
RLIMQ9NVW2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 ELK2BP-201ENST00000415014 1224 ntBASIC15.55■□□□□ 0.08
RLIMQ9NVW2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RLIMQ9NVW2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 209.8 ms