Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 GGT4P-201ENST00000623672 1708 ntBASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 AC046158.3-201ENST00000624947 2558 ntBASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 PMS2P1-201ENST00000431037 1228 ntBASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 AF238378.1-201ENST00000526806 358 ntBASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 AC107918.4-202ENST00000641623 219 ntBASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM1Q9HBL6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 CICP6-201ENST00000457191 2729 ntBASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 CYP2A7P1-201ENST00000595391 815 ntBASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.04■□□□□ 0.16
LRTM1Q9HBL6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms