Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 AC018529.1-201ENST00000613063 361 ntBASIC17.91■□□□□ 0.46
NXF3Q9H4D5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 AC078925.2-201ENST00000624013 1973 ntBASIC17.9■□□□□ 0.46
NXF3Q9H4D5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 GPAA1P2-202ENST00000606848 1787 ntBASIC17.9■□□□□ 0.46
NXF3Q9H4D5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 HLA-H-201ENST00000383620 1096 ntBASIC17.9■□□□□ 0.46
NXF3Q9H4D5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 MIR3197-201ENST00000582241 73 ntBASIC17.9■□□□□ 0.46
NXF3Q9H4D5 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 AC092364.2-202ENST00000597012 1073 ntBASIC17.9■□□□□ 0.46
NXF3Q9H4D5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 SPTSSB-204ENST00000617024 1292 ntBASIC17.9■□□□□ 0.46
NXF3Q9H4D5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 AC080080.1-201ENST00000625121 2420 ntBASIC17.9■□□□□ 0.46
NXF3Q9H4D5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.9■□□□□ 0.46
NXF3Q9H4D5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NXF3Q9H4D5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.89■□□□□ 0.46
NXF3Q9H4D5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NXF3Q9H4D5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
NXF3Q9H4D5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
NXF3Q9H4D5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 OR6D1P-202ENST00000641007 5290 ntBASIC17.89■□□□□ 0.45
NXF3Q9H4D5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 IGHV3-42-201ENST00000520410 361 ntBASIC17.89■□□□□ 0.45
NXF3Q9H4D5 AL390754.1-201ENST00000619088 582 ntBASIC17.89■□□□□ 0.45
NXF3Q9H4D5 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NXF3Q9H4D5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.88■□□□□ 0.45
NXF3Q9H4D5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 AC006538.1-201ENST00000567905 1585 ntBASIC17.88■□□□□ 0.45
NXF3Q9H4D5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 AC069120.2-201ENST00000524091 540 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms