Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 MTDHP5-201ENST00000598980 586 ntBASIC17.53■□□□□ 0.4
LHX5Q9H2C1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LHX5Q9H2C1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 AC002056.1-201ENST00000395613 760 ntBASIC17.52■□□□□ 0.4
LHX5Q9H2C1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LHX5Q9H2C1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LHX5Q9H2C1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
LHX5Q9H2C1 CYP2T1P-202ENST00000641596 2535 ntBASIC17.52■□□□□ 0.39
LHX5Q9H2C1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
LHX5Q9H2C1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LHX5Q9H2C1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LHX5Q9H2C1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LHX5Q9H2C1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 AC004967.1-201ENST00000453589 447 ntBASIC17.51■□□□□ 0.39
LHX5Q9H2C1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 AL161645.1-201ENST00000622716 1255 ntBASIC17.51■□□□□ 0.39
LHX5Q9H2C1 AC079781.4-201ENST00000641908 219 ntBASIC17.51■□□□□ 0.39
LHX5Q9H2C1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.51■□□□□ 0.39
LHX5Q9H2C1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms