Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 AC132872.4-202ENST00000622924 2756 ntBASIC19.35■□□□□ 0.69
PGBD1Q96JS3 ME2P1-201ENST00000426028 1970 ntBASIC19.35■□□□□ 0.69
PGBD1Q96JS3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PGBD1Q96JS3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 YBX2P1-201ENST00000394192 760 ntBASIC19.34■□□□□ 0.69
PGBD1Q96JS3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 BX842568.4-201ENST00000421222 227 ntBASIC19.34■□□□□ 0.69
PGBD1Q96JS3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 AC006538.1-201ENST00000567905 1585 ntBASIC19.34■□□□□ 0.69
PGBD1Q96JS3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PGBD1Q96JS3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PGBD1Q96JS3 SLC22A20-204ENST00000530038 1673 ntBASIC19.33■□□□□ 0.69
PGBD1Q96JS3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.33■□□□□ 0.69
PGBD1Q96JS3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PGBD1Q96JS3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PGBD1Q96JS3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PGBD1Q96JS3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PGBD1Q96JS3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PGBD1Q96JS3 AC092919.2-201ENST00000623631 1645 ntBASIC19.33■□□□□ 0.69
PGBD1Q96JS3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.33■□□□□ 0.69
PGBD1Q96JS3 AC129492.6-201ENST00000611383 1305 ntBASIC19.33■□□□□ 0.69
PGBD1Q96JS3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PGBD1Q96JS3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PGBD1Q96JS3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PGBD1Q96JS3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PGBD1Q96JS3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PGBD1Q96JS3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 AC010327.4-202ENST00000591484 748 ntBASIC19.33■□□□□ 0.68
PGBD1Q96JS3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PGBD1Q96JS3 OR6D1P-202ENST00000641007 5290 ntBASIC19.32■□□□□ 0.68
PGBD1Q96JS3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms