Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 AP002472.1-201ENST00000577490 586 ntBASIC14.65□□□□□ -0.06
TMEM54Q969K7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 AC092919.2-201ENST00000623631 1645 ntBASIC14.65□□□□□ -0.06
TMEM54Q969K7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 CYP2T1P-202ENST00000641596 2535 ntBASIC14.65□□□□□ -0.06
TMEM54Q969K7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM54Q969K7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM54Q969K7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM54Q969K7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM54Q969K7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM54Q969K7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM54Q969K7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM54Q969K7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM54Q969K7 MIR940-201ENST00000401276 94 ntBASIC14.64□□□□□ -0.07
TMEM54Q969K7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM54Q969K7 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM54Q969K7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM54Q969K7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM54Q969K7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TMEM54Q969K7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM54Q969K7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM54Q969K7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 AL078644.1-201ENST00000609881 752 ntBASIC14.63□□□□□ -0.07
TMEM54Q969K7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM54Q969K7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM54Q969K7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms