Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE3BQ7Z3V4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE3BQ7Z3V4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 AC018529.1-201ENST00000613063 361 ntBASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 SPTSSB-204ENST00000617024 1292 ntBASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 AC006538.1-201ENST00000567905 1585 ntBASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE3BQ7Z3V4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 UBALD1-205ENST00000590891 2641 ntBASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE3BQ7Z3V4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 HLA-H-201ENST00000383620 1096 ntBASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 AC003101.2-201ENST00000612557 442 ntBASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms