Protein–RNA interactions for Protein: P09874

PARP1, Poly [ADP-ribose] polymerase 1, humanhuman

Known RBP Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1P09874 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PARP1P09874 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PARP1P09874 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.33■□□□□ 0.68
PARP1P09874 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PARP1P09874 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PARP1P09874 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PARP1P09874 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
PARP1P09874 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
PARP1P09874 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PARP1P09874 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PARP1P09874 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.32■□□□□ 0.68
PARP1P09874 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PARP1P09874 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.32■□□□□ 0.68
PARP1P09874 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PARP1P09874 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PARP1P09874 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PARP1P09874 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PARP1P09874 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 SPCS2P4-201ENST00000436160 681 ntBASIC19.32■□□□□ 0.68
PARP1P09874 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.32■□□□□ 0.68
PARP1P09874 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.32■□□□□ 0.68
PARP1P09874 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.32■□□□□ 0.68
PARP1P09874 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.32■□□□□ 0.68
PARP1P09874 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 AC027612.4-201ENST00000605371 583 ntBASIC19.32■□□□□ 0.68
PARP1P09874 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.32■□□□□ 0.68
PARP1P09874 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
PARP1P09874 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PARP1P09874 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.32■□□□□ 0.68
PARP1P09874 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.31■□□□□ 0.68
PARP1P09874 AC106886.4-201ENST00000623557 2502 ntBASIC19.31■□□□□ 0.68
PARP1P09874 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.31■□□□□ 0.68
PARP1P09874 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PARP1P09874 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PARP1P09874 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
PARP1P09874 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PARP1P09874 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.31■□□□□ 0.68
PARP1P09874 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PARP1P09874 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.31■□□□□ 0.68
PARP1P09874 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.31■□□□□ 0.68
PARP1P09874 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.31■□□□□ 0.68
PARP1P09874 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.31■□□□□ 0.68
PARP1P09874 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PARP1P09874 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.31■□□□□ 0.68
PARP1P09874 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARP1P09874 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PARP1P09874 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARP1P09874 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARP1P09874 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PARP1P09874 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.3■□□□□ 0.68
PARP1P09874 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARP1P09874 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARP1P09874 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARP1P09874 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PARP1P09874 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PARP1P09874 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARP1P09874 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARP1P09874 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARP1P09874 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.3■□□□□ 0.68
PARP1P09874 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARP1P09874 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PARP1P09874 AC005237.2-201ENST00000434368 219 ntBASIC19.3■□□□□ 0.68
PARP1P09874 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.3■□□□□ 0.68
PARP1P09874 IGHV3-62-201ENST00000520057 340 ntBASIC19.3■□□□□ 0.68
PARP1P09874 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.3■□□□□ 0.68
PARP1P09874 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PARP1P09874 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms