Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
GGPS1O95749 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
GGPS1O95749 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GGPS1O95749 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.65■□□□□ 0.58
GGPS1O95749 BASP1P1-201ENST00000430708 665 ntBASIC18.65■□□□□ 0.58
GGPS1O95749 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.65■□□□□ 0.58
GGPS1O95749 INGX-202ENST00000489074 768 ntBASIC18.65■□□□□ 0.58
GGPS1O95749 MIR4745-201ENST00000577608 62 ntBASIC18.65■□□□□ 0.58
GGPS1O95749 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.65■□□□□ 0.58
GGPS1O95749 AJ011932.1-201ENST00000621707 465 ntBASIC18.65■□□□□ 0.58
GGPS1O95749 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GGPS1O95749 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.65■□□□□ 0.58
GGPS1O95749 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GGPS1O95749 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.65■□□□□ 0.58
GGPS1O95749 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.65■□□□□ 0.58
GGPS1O95749 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GGPS1O95749 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 KRT8P39-201ENST00000396270 1433 ntBASIC18.65■□□□□ 0.58
GGPS1O95749 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GGPS1O95749 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GGPS1O95749 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.64■□□□□ 0.58
GGPS1O95749 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GGPS1O95749 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GGPS1O95749 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
GGPS1O95749 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.64■□□□□ 0.57
GGPS1O95749 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.64■□□□□ 0.57
GGPS1O95749 IGHV3-42-201ENST00000520410 361 ntBASIC18.64■□□□□ 0.57
GGPS1O95749 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.64■□□□□ 0.57
GGPS1O95749 RARRES2P9-201ENST00000565168 469 ntBASIC18.64■□□□□ 0.57
GGPS1O95749 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.64■□□□□ 0.57
GGPS1O95749 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.64■□□□□ 0.57
GGPS1O95749 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.64■□□□□ 0.57
GGPS1O95749 AL390754.1-201ENST00000619088 582 ntBASIC18.64■□□□□ 0.57
GGPS1O95749 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.64■□□□□ 0.57
GGPS1O95749 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.64■□□□□ 0.57
GGPS1O95749 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
GGPS1O95749 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GGPS1O95749 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GGPS1O95749 AC012313.1-201ENST00000593393 3059 ntBASIC18.64■□□□□ 0.57
GGPS1O95749 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.64■□□□□ 0.57
GGPS1O95749 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.64■□□□□ 0.57
GGPS1O95749 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.64■□□□□ 0.57
GGPS1O95749 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GGPS1O95749 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GGPS1O95749 FOXO1B-201ENST00000504678 1527 ntBASIC18.64■□□□□ 0.57
GGPS1O95749 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GGPS1O95749 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GGPS1O95749 AP3S2-216ENST00000617003 1561 ntBASIC18.64■□□□□ 0.57
GGPS1O95749 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.63■□□□□ 0.57
GGPS1O95749 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GGPS1O95749 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GGPS1O95749 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GGPS1O95749 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GGPS1O95749 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GGPS1O95749 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.63■□□□□ 0.57
GGPS1O95749 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
GGPS1O95749 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GGPS1O95749 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GGPS1O95749 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GGPS1O95749 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GGPS1O95749 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GGPS1O95749 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
GGPS1O95749 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.63■□□□□ 0.57
GGPS1O95749 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.63■□□□□ 0.57
GGPS1O95749 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.63■□□□□ 0.57
GGPS1O95749 AC069120.2-201ENST00000524091 540 ntBASIC18.63■□□□□ 0.57
GGPS1O95749 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.63■□□□□ 0.57
GGPS1O95749 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.63■□□□□ 0.57
GGPS1O95749 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.63■□□□□ 0.57
GGPS1O95749 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.63■□□□□ 0.57
GGPS1O95749 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.63■□□□□ 0.57
GGPS1O95749 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.63■□□□□ 0.57
GGPS1O95749 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GGPS1O95749 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
GGPS1O95749 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
GGPS1O95749 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GGPS1O95749 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.63■□□□□ 0.57
GGPS1O95749 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
GGPS1O95749 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.63■□□□□ 0.57
GGPS1O95749 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
GGPS1O95749 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GGPS1O95749 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GGPS1O95749 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.63■□□□□ 0.57
GGPS1O95749 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GGPS1O95749 AL391256.1-201ENST00000443260 1855 ntBASIC18.63■□□□□ 0.57
GGPS1O95749 AC106820.2-201ENST00000563775 3264 ntBASIC18.62■□□□□ 0.57
GGPS1O95749 AC060834.1-201ENST00000443027 2032 ntBASIC18.62■□□□□ 0.57
GGPS1O95749 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.62■□□□□ 0.57
GGPS1O95749 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GGPS1O95749 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GGPS1O95749 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GGPS1O95749 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms