Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
UPK1BO75841 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.55□□□□□ -0.08
UPK1BO75841 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.55□□□□□ -0.08
UPK1BO75841 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.54□□□□□ -0.08
UPK1BO75841 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.54□□□□□ -0.08
UPK1BO75841 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
UPK1BO75841 COX5BP2-201ENST00000392354 334 ntBASIC14.54□□□□□ -0.08
UPK1BO75841 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
UPK1BO75841 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
UPK1BO75841 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.54□□□□□ -0.08
UPK1BO75841 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
UPK1BO75841 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.54□□□□□ -0.08
UPK1BO75841 AC019129.2-201ENST00000609837 1235 ntBASIC14.54□□□□□ -0.08
UPK1BO75841 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
UPK1BO75841 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.54□□□□□ -0.08
UPK1BO75841 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.54□□□□□ -0.08
UPK1BO75841 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
UPK1BO75841 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.54□□□□□ -0.08
UPK1BO75841 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
UPK1BO75841 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1BO75841 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
UPK1BO75841 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
UPK1BO75841 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
UPK1BO75841 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.53□□□□□ -0.08
UPK1BO75841 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
UPK1BO75841 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
UPK1BO75841 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.53□□□□□ -0.08
UPK1BO75841 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.53□□□□□ -0.08
UPK1BO75841 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
UPK1BO75841 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.53□□□□□ -0.08
UPK1BO75841 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.53□□□□□ -0.08
UPK1BO75841 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
UPK1BO75841 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.53□□□□□ -0.08
UPK1BO75841 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.53□□□□□ -0.08
UPK1BO75841 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.53□□□□□ -0.08
UPK1BO75841 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.53□□□□□ -0.08
UPK1BO75841 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.53□□□□□ -0.08
UPK1BO75841 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
UPK1BO75841 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
UPK1BO75841 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
UPK1BO75841 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms