Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.14■□□□□ 0.33
COCHO43405 AC138649.4-201ENST00000612222 287 ntBASIC17.14■□□□□ 0.33
COCHO43405 AC020765.3-201ENST00000613051 740 ntBASIC17.14■□□□□ 0.33
COCHO43405 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COCHO43405 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.14■□□□□ 0.33
COCHO43405 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COCHO43405 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
COCHO43405 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COCHO43405 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COCHO43405 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COCHO43405 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.14■□□□□ 0.33
COCHO43405 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
COCHO43405 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COCHO43405 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
COCHO43405 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
COCHO43405 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.13■□□□□ 0.33
COCHO43405 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.13■□□□□ 0.33
COCHO43405 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.13■□□□□ 0.33
COCHO43405 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.13■□□□□ 0.33
COCHO43405 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.13■□□□□ 0.33
COCHO43405 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
COCHO43405 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.13■□□□□ 0.33
COCHO43405 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
COCHO43405 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.13■□□□□ 0.33
COCHO43405 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
COCHO43405 HLA-H-201ENST00000383620 1096 ntBASIC17.13■□□□□ 0.33
COCHO43405 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.13■□□□□ 0.33
COCHO43405 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.13■□□□□ 0.33
COCHO43405 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
COCHO43405 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
COCHO43405 AC098859.1-201ENST00000502915 1238 ntBASIC17.13■□□□□ 0.33
COCHO43405 AC093214.1-201ENST00000511688 1107 ntBASIC17.13■□□□□ 0.33
COCHO43405 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.13■□□□□ 0.33
COCHO43405 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.13■□□□□ 0.33
COCHO43405 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.13■□□□□ 0.33
COCHO43405 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.13■□□□□ 0.33
COCHO43405 AL096865.1-201ENST00000606796 927 ntBASIC17.13■□□□□ 0.33
COCHO43405 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
COCHO43405 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.13■□□□□ 0.33
COCHO43405 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
COCHO43405 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
COCHO43405 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
COCHO43405 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
COCHO43405 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.13■□□□□ 0.33
COCHO43405 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COCHO43405 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
COCHO43405 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.12■□□□□ 0.33
COCHO43405 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.12■□□□□ 0.33
COCHO43405 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
COCHO43405 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
COCHO43405 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.12■□□□□ 0.33
COCHO43405 FAM8A3P-201ENST00000427218 844 ntBASIC17.12■□□□□ 0.33
COCHO43405 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.12■□□□□ 0.33
COCHO43405 AC093724.1-201ENST00000448659 1027 ntBASIC17.12■□□□□ 0.33
COCHO43405 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.12■□□□□ 0.33
COCHO43405 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.12■□□□□ 0.33
COCHO43405 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.12■□□□□ 0.33
COCHO43405 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.12■□□□□ 0.33
COCHO43405 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.12■□□□□ 0.33
COCHO43405 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.12■□□□□ 0.33
COCHO43405 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.12■□□□□ 0.33
COCHO43405 AC003101.2-201ENST00000612557 442 ntBASIC17.12■□□□□ 0.33
COCHO43405 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.12■□□□□ 0.33
COCHO43405 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms