Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 AC105020.6-201ENST00000621523 1217 ntBASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 AC092135.3-201ENST00000624151 1846 ntBASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.04
LINC01558Q9Y6Z2 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.04
LINC01558Q9Y6Z2 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.04
LINC01558Q9Y6Z2 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 PTCHD3P2-201ENST00000424937 1205 ntBASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 OS9-206ENST00000435406 2346 ntTSL 2 BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 AC140479.7-201ENST00000636301 2332 ntBASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LINC01558Q9Y6Z2 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms