Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 AC091167.2-201ENST00000579581 588 ntBASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 RN7SL510P-201ENST00000581311 263 ntBASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 AC008667.4-201ENST00000607370 168 ntBASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 AL691432.3-201ENST00000621860 400 ntBASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 AC022188.1-201ENST00000620960 1664 ntBASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 AL513523.2-202ENST00000427283 2040 ntBASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 AC079328.2-201ENST00000561241 3354 ntBASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 AC129492.6-201ENST00000611383 1305 ntBASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 STK33P1-201ENST00000423835 1218 ntBASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 SLC25A6P2-201ENST00000497974 877 ntBASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 MPDU1-223ENST00000582151 728 ntBASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 AL356488.2-201ENST00000602755 427 ntBASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 AC005593.1-201ENST00000624894 515 ntBASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA11Q9Y5H2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 LINC00554-201ENST00000564841 3011 ntBASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 HNRNPDP1-201ENST00000439535 754 ntBASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 IGHV3-65-201ENST00000523210 341 ntBASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 AL662844.4-201ENST00000606367 2838 ntBASIC16.21■□□□□ 0.19
PCDHGA11Q9Y5H2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.21■□□□□ 0.18
PCDHGA11Q9Y5H2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
PCDHGA11Q9Y5H2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms