Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 LINC00895-201ENST00000629028 1637 ntBASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KCNIP3Q9Y2W7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 LINC01568-207ENST00000641790 1380 ntBASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 AC003669.1-201ENST00000334569 611 ntBASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 GUSBP12-201ENST00000513727 720 ntBASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 AL138966.2-201ENST00000621997 464 ntBASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 AC073912.3-201ENST00000624414 853 ntBASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KCNIP3Q9Y2W7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 AL353593.2-201ENST00000602529 1483 ntBASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 AL359075.1-203ENST00000462729 1002 ntBASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.01□□□□□ -0.17
KCNIP3Q9Y2W7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms