Protein–RNA interactions for Protein: Q9HCM2

PLXNA4, Plexin-A4, humanhuman

Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA4Q9HCM2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 ELK1P1-201ENST00000485699 580 ntBASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 RAB43P1-201ENST00000561790 589 ntBASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PLXNA4Q9HCM2 AC120498.9-201ENST00000339021 3867 ntBASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 AC123567.1-201ENST00000548294 1261 ntBASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 AC092337.1-201ENST00000568699 1129 ntBASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 AL162274.1-201ENST00000617191 1098 ntBASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 AL033527.5-202ENST00000641632 1098 ntBASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLXNA4Q9HCM2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 SERBP1P3-201ENST00000459980 809 ntBASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 CLK3P2-201ENST00000427566 1453 ntBASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.35■□□□□ 0.37
PLXNA4Q9HCM2 AL031731.1-201ENST00000642131 2094 ntBASIC17.34■□□□□ 0.37
PLXNA4Q9HCM2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PLXNA4Q9HCM2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.34■□□□□ 0.37
PLXNA4Q9HCM2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PLXNA4Q9HCM2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms