Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.98■□□□□ 0.63
CCDC94Q9BW85 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 AC133963.1-201ENST00000504166 1679 ntBASIC18.98■□□□□ 0.63
CCDC94Q9BW85 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC94Q9BW85 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 AC012640.2-201ENST00000561606 901 ntBASIC18.97■□□□□ 0.63
CCDC94Q9BW85 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC94Q9BW85 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 AP000347.1-202ENST00000435868 847 ntBASIC18.96■□□□□ 0.63
CCDC94Q9BW85 AC092910.1-201ENST00000482027 1129 ntBASIC18.96■□□□□ 0.63
CCDC94Q9BW85 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 NCF1C-201ENST00000438382 1427 ntBASIC18.96■□□□□ 0.63
CCDC94Q9BW85 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC94Q9BW85 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC94Q9BW85 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC94Q9BW85 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC94Q9BW85 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC94Q9BW85 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC94Q9BW85 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC94Q9BW85 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC94Q9BW85 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC94Q9BW85 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC94Q9BW85 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC94Q9BW85 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC94Q9BW85 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC94Q9BW85 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC94Q9BW85 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms