Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CALR3Q96L12 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.69■□□□□ 0.42
CALR3Q96L12 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CALR3Q96L12 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.69■□□□□ 0.42
CALR3Q96L12 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.69■□□□□ 0.42
CALR3Q96L12 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.69■□□□□ 0.42
CALR3Q96L12 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.69■□□□□ 0.42
CALR3Q96L12 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.69■□□□□ 0.42
CALR3Q96L12 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CALR3Q96L12 AC004706.3-202ENST00000621574 984 ntBASIC17.69■□□□□ 0.42
CALR3Q96L12 AP001350.2-201ENST00000625104 1094 ntBASIC17.69■□□□□ 0.42
CALR3Q96L12 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.69■□□□□ 0.42
CALR3Q96L12 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.69■□□□□ 0.42
CALR3Q96L12 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.69■□□□□ 0.42
CALR3Q96L12 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CALR3Q96L12 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CALR3Q96L12 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.69■□□□□ 0.42
CALR3Q96L12 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CALR3Q96L12 AL031731.1-201ENST00000642131 2094 ntBASIC17.68■□□□□ 0.42
CALR3Q96L12 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CALR3Q96L12 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CALR3Q96L12 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.68■□□□□ 0.42
CALR3Q96L12 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 HYMAI-201ENST00000635591 3347 ntBASIC17.68■□□□□ 0.42
CALR3Q96L12 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CALR3Q96L12 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.68■□□□□ 0.42
CALR3Q96L12 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.68■□□□□ 0.42
CALR3Q96L12 AC087163.2-201ENST00000457299 853 ntBASIC17.68■□□□□ 0.42
CALR3Q96L12 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.68■□□□□ 0.42
CALR3Q96L12 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.68■□□□□ 0.42
CALR3Q96L12 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.68■□□□□ 0.42
CALR3Q96L12 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.68■□□□□ 0.42
CALR3Q96L12 GGT4P-201ENST00000623672 1708 ntBASIC17.68■□□□□ 0.42
CALR3Q96L12 AC131009.4-201ENST00000624048 1740 ntBASIC17.68■□□□□ 0.42
CALR3Q96L12 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CALR3Q96L12 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 AL353732.1-201ENST00000569618 1459 ntBASIC17.68■□□□□ 0.42
CALR3Q96L12 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 AL596087.1-201ENST00000400979 1969 ntBASIC17.68■□□□□ 0.42
CALR3Q96L12 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALR3Q96L12 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CALR3Q96L12 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.68■□□□□ 0.42
CALR3Q96L12 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.67■□□□□ 0.42
CALR3Q96L12 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.67■□□□□ 0.42
CALR3Q96L12 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.67■□□□□ 0.42
CALR3Q96L12 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.67■□□□□ 0.42
CALR3Q96L12 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.67■□□□□ 0.42
CALR3Q96L12 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.67■□□□□ 0.42
CALR3Q96L12 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.67■□□□□ 0.42
CALR3Q96L12 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.67■□□□□ 0.42
CALR3Q96L12 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.67■□□□□ 0.42
CALR3Q96L12 AL355877.3-201ENST00000622820 899 ntBASIC17.67■□□□□ 0.42
CALR3Q96L12 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms