Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.97■□□□□ 0.31
CHPFQ8IZ52 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.97■□□□□ 0.31
CHPFQ8IZ52 AP000842.3-202ENST00000569238 1080 ntBASIC16.97■□□□□ 0.31
CHPFQ8IZ52 AJ011932.1-201ENST00000621707 465 ntBASIC16.97■□□□□ 0.31
CHPFQ8IZ52 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHPFQ8IZ52 AC124067.4-201ENST00000519691 2379 ntBASIC16.97■□□□□ 0.31
CHPFQ8IZ52 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHPFQ8IZ52 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHPFQ8IZ52 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHPFQ8IZ52 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHPFQ8IZ52 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.97■□□□□ 0.31
CHPFQ8IZ52 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHPFQ8IZ52 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.97■□□□□ 0.31
CHPFQ8IZ52 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.97■□□□□ 0.31
CHPFQ8IZ52 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHPFQ8IZ52 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CHPFQ8IZ52 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 IGHV3-42-201ENST00000520410 361 ntBASIC16.96■□□□□ 0.31
CHPFQ8IZ52 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 AC140878.1-201ENST00000565277 250 ntBASIC16.96■□□□□ 0.31
CHPFQ8IZ52 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 AC021097.1-201ENST00000607902 574 ntBASIC16.96■□□□□ 0.31
CHPFQ8IZ52 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.96■□□□□ 0.31
CHPFQ8IZ52 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.96■□□□□ 0.3
CHPFQ8IZ52 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHPFQ8IZ52 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
CHPFQ8IZ52 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
CHPFQ8IZ52 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.96■□□□□ 0.3
CHPFQ8IZ52 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.96■□□□□ 0.3
CHPFQ8IZ52 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHPFQ8IZ52 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHPFQ8IZ52 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHPFQ8IZ52 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 ALG1L8P-201ENST00000533887 760 ntBASIC16.95■□□□□ 0.3
CHPFQ8IZ52 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 CROCCP2-202ENST00000412962 2773 ntBASIC16.95■□□□□ 0.3
CHPFQ8IZ52 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 AC084018.2-201ENST00000613093 2607 ntBASIC16.95■□□□□ 0.3
CHPFQ8IZ52 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.95■□□□□ 0.3
CHPFQ8IZ52 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms