Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 DUX4L17-201ENST00000557360 1267 ntBASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 NCF1C-201ENST00000438382 1427 ntBASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 AC007950.2-201ENST00000615045 2347 ntBASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC50Q8IVM0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 AC064862.7-201ENST00000604520 867 ntBASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 AL590787.1-201ENST00000568856 1315 ntBASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC50Q8IVM0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 AL353135.1-201ENST00000606729 504 ntBASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 AL022326.1-202ENST00000641533 845 ntBASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC50Q8IVM0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms