Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 AC005521.1-201ENST00000393351 872 ntBASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 AC091607.1-201ENST00000490318 1060 ntBASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 AC012306.2-201ENST00000609350 630 ntBASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 AC097493.4-201ENST00000641197 219 ntBASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 NORAD-201ENST00000565493 5339 ntBASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 AC004817.3-201ENST00000602957 2129 ntBASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 AC144831.1-201ENST00000573312 2656 ntBASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 SPDYE21P-201ENST00000413323 827 ntBASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 LINC00982-205ENST00000420957 435 ntBASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 KRT18P57-201ENST00000443599 1254 ntBASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 AL671277.2-201ENST00000458060 996 ntBASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 INTS4P1-201ENST00000438455 1935 ntBASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00242Q5T6M2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms