Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 REXO1L12P-201ENST00000622156 912 ntBASIC13.18□□□□□ -0.3
CCL20P78556 AC073648.6-201ENST00000641589 218 ntBASIC13.18□□□□□ -0.3
CCL20P78556 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL20P78556 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL20P78556 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CCL20P78556 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL20P78556 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.18□□□□□ -0.3
CCL20P78556 AC097637.2-201ENST00000624096 1997 ntBASIC13.18□□□□□ -0.3
CCL20P78556 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL20P78556 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL20P78556 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL20P78556 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL20P78556 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL20P78556 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL20P78556 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
CCL20P78556 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL20P78556 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL20P78556 CCR12P-201ENST00000446203 998 ntBASIC13.17□□□□□ -0.3
CCL20P78556 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL20P78556 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL20P78556 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL20P78556 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CCL20P78556 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL20P78556 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CCL20P78556 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL20P78556 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CCL20P78556 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL20P78556 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCL20P78556 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL20P78556 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCL20P78556 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL20P78556 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL20P78556 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL20P78556 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL20P78556 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL20P78556 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL20P78556 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.16□□□□□ -0.3
CCL20P78556 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL20P78556 ESRRAP1-201ENST00000400596 1257 ntBASIC13.16□□□□□ -0.3
CCL20P78556 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL20P78556 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.16□□□□□ -0.3
CCL20P78556 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL20P78556 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL20P78556 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.16□□□□□ -0.3
CCL20P78556 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL20P78556 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.16□□□□□ -0.3
CCL20P78556 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL20P78556 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.16□□□□□ -0.3
CCL20P78556 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL20P78556 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms